Julia @distributed: subsequent code run before all workers finish










1















I have been headbutting on a wall for a few days around this code:



using Distributed
using SharedArrays

# Dimension size
M=10;
N=100;

z_ijw = zeros(Float64,M,N,M)
z_ijw_tmp = SharedArrayFloat64(M*M*N)
i2s = CartesianIndices(z_ijw)

@distributed for iall=1:(M*M*N)
# get index
i=i2s[iall][1]
j=i2s[iall][2]
w=i2s[iall][3]
# Assign function value
z_ijw_tmp[iall]=sqrt(i+j+w) # Any random function would do
end

# Print the last element of the array
println(z_ijw_tmp[end])
println(z_ijw_tmp[end])
println(z_ijw_tmp[end])


The first printed out number is always 0, the second number is either 0 or 10.95... (sqrt of 120, which is correct). The 3rd is either 0 or 10.95 (if the 2nd is 0)



So it appears that the print code (@mainthread?) is allowed to run before all the workers finish. Is there anyway for the print code to run properly the first time (without a wait command)



Without multiple println, I thought it was a problem with scope and spend a few days reading about it @.@










share|improve this question




























    1















    I have been headbutting on a wall for a few days around this code:



    using Distributed
    using SharedArrays

    # Dimension size
    M=10;
    N=100;

    z_ijw = zeros(Float64,M,N,M)
    z_ijw_tmp = SharedArrayFloat64(M*M*N)
    i2s = CartesianIndices(z_ijw)

    @distributed for iall=1:(M*M*N)
    # get index
    i=i2s[iall][1]
    j=i2s[iall][2]
    w=i2s[iall][3]
    # Assign function value
    z_ijw_tmp[iall]=sqrt(i+j+w) # Any random function would do
    end

    # Print the last element of the array
    println(z_ijw_tmp[end])
    println(z_ijw_tmp[end])
    println(z_ijw_tmp[end])


    The first printed out number is always 0, the second number is either 0 or 10.95... (sqrt of 120, which is correct). The 3rd is either 0 or 10.95 (if the 2nd is 0)



    So it appears that the print code (@mainthread?) is allowed to run before all the workers finish. Is there anyway for the print code to run properly the first time (without a wait command)



    Without multiple println, I thought it was a problem with scope and spend a few days reading about it @.@










    share|improve this question


























      1












      1








      1








      I have been headbutting on a wall for a few days around this code:



      using Distributed
      using SharedArrays

      # Dimension size
      M=10;
      N=100;

      z_ijw = zeros(Float64,M,N,M)
      z_ijw_tmp = SharedArrayFloat64(M*M*N)
      i2s = CartesianIndices(z_ijw)

      @distributed for iall=1:(M*M*N)
      # get index
      i=i2s[iall][1]
      j=i2s[iall][2]
      w=i2s[iall][3]
      # Assign function value
      z_ijw_tmp[iall]=sqrt(i+j+w) # Any random function would do
      end

      # Print the last element of the array
      println(z_ijw_tmp[end])
      println(z_ijw_tmp[end])
      println(z_ijw_tmp[end])


      The first printed out number is always 0, the second number is either 0 or 10.95... (sqrt of 120, which is correct). The 3rd is either 0 or 10.95 (if the 2nd is 0)



      So it appears that the print code (@mainthread?) is allowed to run before all the workers finish. Is there anyway for the print code to run properly the first time (without a wait command)



      Without multiple println, I thought it was a problem with scope and spend a few days reading about it @.@










      share|improve this question
















      I have been headbutting on a wall for a few days around this code:



      using Distributed
      using SharedArrays

      # Dimension size
      M=10;
      N=100;

      z_ijw = zeros(Float64,M,N,M)
      z_ijw_tmp = SharedArrayFloat64(M*M*N)
      i2s = CartesianIndices(z_ijw)

      @distributed for iall=1:(M*M*N)
      # get index
      i=i2s[iall][1]
      j=i2s[iall][2]
      w=i2s[iall][3]
      # Assign function value
      z_ijw_tmp[iall]=sqrt(i+j+w) # Any random function would do
      end

      # Print the last element of the array
      println(z_ijw_tmp[end])
      println(z_ijw_tmp[end])
      println(z_ijw_tmp[end])


      The first printed out number is always 0, the second number is either 0 or 10.95... (sqrt of 120, which is correct). The 3rd is either 0 or 10.95 (if the 2nd is 0)



      So it appears that the print code (@mainthread?) is allowed to run before all the workers finish. Is there anyway for the print code to run properly the first time (without a wait command)



      Without multiple println, I thought it was a problem with scope and spend a few days reading about it @.@







      asynchronous julia-lang distributed






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      share|improve this question













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      edited Nov 12 '18 at 14:44







      Huy Tran

















      asked Nov 12 '18 at 14:08









      Huy TranHuy Tran

      112




      112






















          1 Answer
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          active

          oldest

          votes


















          2














          @distributed with a reducer function, i.e. @distributed (+), will be synced, whereas @distributed without a reducer function will be started asynchronously.



          Putting a @sync in front of your @distributed should make the code behave the way you want it to.



          This is also noted in the documentation here:




          Note that without a reducer function, @distributed executes asynchronously, i.e. it spawns independent tasks on all available workers and returns immediately without waiting for completion. To wait for completion, prefix the call with @sync







          share|improve this answer























          • Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

            – Huy Tran
            Nov 12 '18 at 17:06












          • I don't think it's a problem at all. It's well defined and documented behavior.

            – crstnbr
            Nov 12 '18 at 18:56










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          1 Answer
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          active

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          1 Answer
          1






          active

          oldest

          votes









          active

          oldest

          votes






          active

          oldest

          votes









          2














          @distributed with a reducer function, i.e. @distributed (+), will be synced, whereas @distributed without a reducer function will be started asynchronously.



          Putting a @sync in front of your @distributed should make the code behave the way you want it to.



          This is also noted in the documentation here:




          Note that without a reducer function, @distributed executes asynchronously, i.e. it spawns independent tasks on all available workers and returns immediately without waiting for completion. To wait for completion, prefix the call with @sync







          share|improve this answer























          • Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

            – Huy Tran
            Nov 12 '18 at 17:06












          • I don't think it's a problem at all. It's well defined and documented behavior.

            – crstnbr
            Nov 12 '18 at 18:56















          2














          @distributed with a reducer function, i.e. @distributed (+), will be synced, whereas @distributed without a reducer function will be started asynchronously.



          Putting a @sync in front of your @distributed should make the code behave the way you want it to.



          This is also noted in the documentation here:




          Note that without a reducer function, @distributed executes asynchronously, i.e. it spawns independent tasks on all available workers and returns immediately without waiting for completion. To wait for completion, prefix the call with @sync







          share|improve this answer























          • Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

            – Huy Tran
            Nov 12 '18 at 17:06












          • I don't think it's a problem at all. It's well defined and documented behavior.

            – crstnbr
            Nov 12 '18 at 18:56













          2












          2








          2







          @distributed with a reducer function, i.e. @distributed (+), will be synced, whereas @distributed without a reducer function will be started asynchronously.



          Putting a @sync in front of your @distributed should make the code behave the way you want it to.



          This is also noted in the documentation here:




          Note that without a reducer function, @distributed executes asynchronously, i.e. it spawns independent tasks on all available workers and returns immediately without waiting for completion. To wait for completion, prefix the call with @sync







          share|improve this answer













          @distributed with a reducer function, i.e. @distributed (+), will be synced, whereas @distributed without a reducer function will be started asynchronously.



          Putting a @sync in front of your @distributed should make the code behave the way you want it to.



          This is also noted in the documentation here:




          Note that without a reducer function, @distributed executes asynchronously, i.e. it spawns independent tasks on all available workers and returns immediately without waiting for completion. To wait for completion, prefix the call with @sync








          share|improve this answer












          share|improve this answer



          share|improve this answer










          answered Nov 12 '18 at 15:43









          crstnbrcrstnbr

          3,81411022




          3,81411022












          • Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

            – Huy Tran
            Nov 12 '18 at 17:06












          • I don't think it's a problem at all. It's well defined and documented behavior.

            – crstnbr
            Nov 12 '18 at 18:56

















          • Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

            – Huy Tran
            Nov 12 '18 at 17:06












          • I don't think it's a problem at all. It's well defined and documented behavior.

            – crstnbr
            Nov 12 '18 at 18:56
















          Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

          – Huy Tran
          Nov 12 '18 at 17:06






          Thank you!! I am surprised I this is not common problem for everyone else. All examples are to be applied on REPL (step by step), so the problem only emerges when you run it all in a script.

          – Huy Tran
          Nov 12 '18 at 17:06














          I don't think it's a problem at all. It's well defined and documented behavior.

          – crstnbr
          Nov 12 '18 at 18:56





          I don't think it's a problem at all. It's well defined and documented behavior.

          – crstnbr
          Nov 12 '18 at 18:56

















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